As of 2021, the CBS and CFMM members at UWO have access to a shared compute canada allocation for priority access to CPUs and total shared storage of 90TB. To request access please contact Ali Khan.
Prerequisites:
- You have applied for a Canada Canada account at http://ccdb.computecanada.ca
- You have been added to the CBS/CFMM Compute Canada allocation (ctb-akhanf-ab)
Steps:
Log in
ssh graham.computecanada.ca
Set-up neuroglia-helpers and start-up script
git clone http://github.com/khanlab/neuroglia-helpers ~/neuroglia-helpers
~/neuroglia-helpers/setup.sh ctb-akhanf-ab
Log out and back in to activate your login script.
Test out the set-up by running bidsBatch, which should list the available BIDS Apps you can run.
Remember that the number of files are very limited in the project/ folder and this is only recommended for storing large tar/zip files. You should use the scratch/ folder for all active runs.
Happy computing!
Ali